Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm13036-201ENSMUST00000117799 748 ntBASIC17.06■□□□□ 0.32
TraipQ8VIG6 Gm15173-201ENSMUST00000122049 433 ntBASIC17.06■□□□□ 0.32
TraipQ8VIG6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TraipQ8VIG6 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.06■□□□□ 0.32
TraipQ8VIG6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Gm8344-201ENSMUST00000119813 856 ntBASIC17.05■□□□□ 0.32
TraipQ8VIG6 Gm6257-201ENSMUST00000163864 910 ntBASIC17.05■□□□□ 0.32
TraipQ8VIG6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TraipQ8VIG6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TraipQ8VIG6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.03■□□□□ 0.32
TraipQ8VIG6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.03■□□□□ 0.32
TraipQ8VIG6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TraipQ8VIG6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Gm27646-201ENSMUST00000183989 110 ntBASIC17.02■□□□□ 0.32
TraipQ8VIG6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Gm5364-201ENSMUST00000216789 889 ntBASIC17.02■□□□□ 0.32
TraipQ8VIG6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.02■□□□□ 0.32
TraipQ8VIG6 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.02■□□□□ 0.32
TraipQ8VIG6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TraipQ8VIG6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TraipQ8VIG6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TraipQ8VIG6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TraipQ8VIG6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms