Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.25■□□□□ 0.19
Rpa1Q8VEE4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpa1Q8VEE4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Gm7638-201ENSMUST00000121348 967 ntBASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rpa1Q8VEE4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Gm12527-201ENSMUST00000117967 564 ntBASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Il3ra-202ENSMUST00000223589 738 ntBASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpa1Q8VEE4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rpa1Q8VEE4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms