Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smg8Q8VE18 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.1■□□□□ 0.33
Smg8Q8VE18 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smg8Q8VE18 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.1■□□□□ 0.33
Smg8Q8VE18 Gm6550-201ENSMUST00000187574 993 ntBASIC17.1■□□□□ 0.33
Smg8Q8VE18 Gm15590-201ENSMUST00000078419 552 ntBASIC17.1■□□□□ 0.33
Smg8Q8VE18 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smg8Q8VE18 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg8Q8VE18 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg8Q8VE18 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smg8Q8VE18 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smg8Q8VE18 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm8825-201ENSMUST00000182565 998 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm4518-201ENSMUST00000182638 718 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.09■□□□□ 0.33
Smg8Q8VE18 AV026068-213ENSMUST00000223675 1171 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.09■□□□□ 0.33
Smg8Q8VE18 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smg8Q8VE18 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smg8Q8VE18 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smg8Q8VE18 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smg8Q8VE18 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Smg8Q8VE18 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Gm5364-201ENSMUST00000216789 889 ntBASIC17.08■□□□□ 0.32
Smg8Q8VE18 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smg8Q8VE18 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.07■□□□□ 0.32
Smg8Q8VE18 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.07■□□□□ 0.32
Smg8Q8VE18 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.07■□□□□ 0.32
Smg8Q8VE18 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smg8Q8VE18 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms