Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx39aQ8VDW0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ddx39aQ8VDW0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ddx39aQ8VDW0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx39aQ8VDW0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx39aQ8VDW0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx39aQ8VDW0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx39aQ8VDW0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx39aQ8VDW0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Gm1401-201ENSMUST00000122048 772 ntBASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx39aQ8VDW0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Gm7230-201ENSMUST00000173026 815 ntBASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx39aQ8VDW0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Mir5126-201ENSMUST00000175513 77 ntBASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx39aQ8VDW0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Gm11780-201ENSMUST00000136880 516 ntBASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Mir6404-201ENSMUST00000183699 94 ntBASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx39aQ8VDW0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms