Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.66■□□□□ 0.42
Rpap2Q8VC34 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpap2Q8VC34 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Gm27357-201ENSMUST00000183754 135 ntBASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpap2Q8VC34 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rpap2Q8VC34 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpap2Q8VC34 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpap2Q8VC34 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Gm44454-201ENSMUST00000198541 138 ntBASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpap2Q8VC34 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms