Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Gm6433-201ENSMUST00000118634 875 ntBASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Gm22697-201ENSMUST00000175194 63 ntBASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps39Q8R5L3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps39Q8R5L3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Gm11355-201ENSMUST00000121120 306 ntBASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Mir6982-201ENSMUST00000184354 68 ntBASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Gm37722-201ENSMUST00000193757 208 ntBASIC16.11■□□□□ 0.17
Vps39Q8R5L3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Vps39Q8R5L3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps39Q8R5L3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps39Q8R5L3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms