Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cd109Q8R422 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cd109Q8R422 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC22.69■■□□□ 1.22
Cd109Q8R422 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Cd109Q8R422 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
Cd109Q8R422 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC22.69■■□□□ 1.22
Cd109Q8R422 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC22.69■■□□□ 1.22
Cd109Q8R422 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cd109Q8R422 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Cd109Q8R422 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC22.69■■□□□ 1.22
Cd109Q8R422 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cd109Q8R422 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cd109Q8R422 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cd109Q8R422 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC22.68■■□□□ 1.22
Cd109Q8R422 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC22.68■■□□□ 1.22
Cd109Q8R422 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
Cd109Q8R422 AC151286.1-201ENSMUST00000198489 145 ntBASIC22.68■■□□□ 1.22
Cd109Q8R422 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Cd109Q8R422 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Gm15500-202ENSMUST00000071641 1019 ntBASIC22.68■■□□□ 1.22
Cd109Q8R422 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC22.68■■□□□ 1.22
Cd109Q8R422 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cd109Q8R422 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC22.67■■□□□ 1.22
Cd109Q8R422 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC22.67■■□□□ 1.22
Cd109Q8R422 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 AC127302.2-201ENSMUST00000215212 268 ntBASIC22.67■■□□□ 1.22
Cd109Q8R422 AC122024.2-201ENSMUST00000220086 871 ntBASIC22.67■■□□□ 1.22
Cd109Q8R422 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Gm38318-201ENSMUST00000195769 1706 ntBASIC22.67■■□□□ 1.22
Cd109Q8R422 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cd109Q8R422 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cd109Q8R422 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cd109Q8R422 Gm17968-201ENSMUST00000194902 784 ntBASIC22.66■■□□□ 1.22
Cd109Q8R422 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cd109Q8R422 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC22.66■■□□□ 1.22
Cd109Q8R422 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC22.66■■□□□ 1.22
Cd109Q8R422 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cd109Q8R422 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC22.66■■□□□ 1.22
Cd109Q8R422 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cd109Q8R422 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC22.65■■□□□ 1.22
Cd109Q8R422 Chchd1-203ENSMUST00000224633 557 ntBASIC22.65■■□□□ 1.22
Cd109Q8R422 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Cd109Q8R422 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Cd109Q8R422 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC22.65■■□□□ 1.22
Cd109Q8R422 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Cd109Q8R422 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Cd109Q8R422 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC22.65■■□□□ 1.22
Cd109Q8R422 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cd109Q8R422 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cd109Q8R422 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cd109Q8R422 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cd109Q8R422 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cd109Q8R422 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Cd109Q8R422 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cd109Q8R422 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cd109Q8R422 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cd109Q8R422 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC22.64■■□□□ 1.21
Cd109Q8R422 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Cd109Q8R422 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC22.64■■□□□ 1.21
Cd109Q8R422 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cd109Q8R422 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cd109Q8R422 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cd109Q8R422 Rbfox2-206ENSMUST00000227314 1810 ntBASIC22.63■■□□□ 1.21
Cd109Q8R422 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cd109Q8R422 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cd109Q8R422 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cd109Q8R422 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cd109Q8R422 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC22.63■■□□□ 1.21
Cd109Q8R422 AC121598.2-201ENSMUST00000228376 2325 ntBASIC22.63■■□□□ 1.21
Cd109Q8R422 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms