Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slf1Q8R3P9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slf1Q8R3P9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Slf1Q8R3P9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.27■□□□□ 0.2
Slf1Q8R3P9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slf1Q8R3P9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.27■□□□□ 0.19
Slf1Q8R3P9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slf1Q8R3P9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slf1Q8R3P9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slf1Q8R3P9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slf1Q8R3P9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slf1Q8R3P9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.27■□□□□ 0.19
Slf1Q8R3P9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms