Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup58Q8R332 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nup58Q8R332 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nup58Q8R332 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nup58Q8R332 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nup58Q8R332 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup58Q8R332 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nup58Q8R332 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.26■□□□□ 0.35
Nup58Q8R332 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nup58Q8R332 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Nup58Q8R332 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Nup58Q8R332 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.25■□□□□ 0.35
Nup58Q8R332 Gm23634-201ENSMUST00000175071 91 ntBASIC17.25■□□□□ 0.35
Nup58Q8R332 Gm21362-201ENSMUST00000194272 928 ntBASIC17.25■□□□□ 0.35
Nup58Q8R332 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nup58Q8R332 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nup58Q8R332 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Nup58Q8R332 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nup58Q8R332 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nup58Q8R332 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nup58Q8R332 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Nup58Q8R332 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.24■□□□□ 0.35
Nup58Q8R332 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.24■□□□□ 0.35
Nup58Q8R332 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.24■□□□□ 0.35
Nup58Q8R332 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nup58Q8R332 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nup58Q8R332 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nup58Q8R332 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nup58Q8R332 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nup58Q8R332 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Nup58Q8R332 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.23■□□□□ 0.35
Nup58Q8R332 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Gm44450-201ENSMUST00000199528 114 ntBASIC17.23■□□□□ 0.35
Nup58Q8R332 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nup58Q8R332 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nup58Q8R332 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nup58Q8R332 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Nup58Q8R332 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.22■□□□□ 0.35
Nup58Q8R332 Gm36967-201ENSMUST00000193814 266 ntBASIC17.22■□□□□ 0.35
Nup58Q8R332 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.22■□□□□ 0.35
Nup58Q8R332 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nup58Q8R332 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms