Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp7Q8R1T1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Gm4995-201ENSMUST00000117247 432 ntBASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Gm11764-201ENSMUST00000120221 623 ntBASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Gm27397-201ENSMUST00000184997 107 ntBASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp7Q8R1T1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Gm5682-201ENSMUST00000173402 505 ntBASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Gm24513-201ENSMUST00000174964 138 ntBASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp7Q8R1T1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp7Q8R1T1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp7Q8R1T1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp7Q8R1T1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp7Q8R1T1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp7Q8R1T1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Gm14822-201ENSMUST00000122247 291 ntBASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp7Q8R1T1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp7Q8R1T1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms