Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nudcd3Q8R1N4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Asic1-205ENSMUST00000228185 1818 ntBASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Phf7-203ENSMUST00000226565 1971 ntBASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nudcd3Q8R1N4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.1■□□□□ 0.17
Nudcd3Q8R1N4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Timm23-208ENSMUST00000226683 750 ntBASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nudcd3Q8R1N4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nudcd3Q8R1N4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms