Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cchcr1Q8K2I2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.03■□□□□ 0.64
Cchcr1Q8K2I2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Gm10052-201ENSMUST00000168019 960 ntBASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Gm44430-201ENSMUST00000203376 995 ntBASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Gm7729-201ENSMUST00000050143 801 ntBASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cchcr1Q8K2I2 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.02■□□□□ 0.63
Cchcr1Q8K2I2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cchcr1Q8K2I2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cchcr1Q8K2I2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cchcr1Q8K2I2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cchcr1Q8K2I2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cchcr1Q8K2I2 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Mir6982-201ENSMUST00000184354 68 ntBASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Gm10252-201ENSMUST00000209541 832 ntBASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Gm18032-201ENSMUST00000222541 538 ntBASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cchcr1Q8K2I2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Gm6858-201ENSMUST00000208582 1468 ntBASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms