Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm13597-201ENSMUST00000121239 375 ntBASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm17271-201ENSMUST00000165535 355 ntBASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.19■□□□□ 0.18
Rtn4rl1Q8K0S5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm7063-201ENSMUST00000186840 981 ntBASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn4rl1Q8K0S5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm14701-201ENSMUST00000117156 348 ntBASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm9682-201ENSMUST00000197505 556 ntBASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn4rl1Q8K0S5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rl1Q8K0S5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms