Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clip4Q8CI96 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Gm13186-201ENSMUST00000118031 316 ntBASIC16.24■□□□□ 0.19
Clip4Q8CI96 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Gm37722-201ENSMUST00000193757 208 ntBASIC16.24■□□□□ 0.19
Clip4Q8CI96 Gm33142-201ENSMUST00000193913 867 ntBASIC16.24■□□□□ 0.19
Clip4Q8CI96 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.24■□□□□ 0.19
Clip4Q8CI96 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clip4Q8CI96 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.23■□□□□ 0.19
Clip4Q8CI96 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Clip4Q8CI96 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clip4Q8CI96 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Gm21362-201ENSMUST00000194272 928 ntBASIC16.22■□□□□ 0.19
Clip4Q8CI96 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.22■□□□□ 0.19
Clip4Q8CI96 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.22■□□□□ 0.19
Clip4Q8CI96 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.21■□□□□ 0.19
Clip4Q8CI96 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms