Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Gm38027-201ENSMUST00000192315 235 ntBASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Calcoco1Q8CGU1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Calcoco1Q8CGU1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Calcoco1Q8CGU1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.83■□□□□ 0.29
Calcoco1Q8CGU1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Calcoco1Q8CGU1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Calcoco1Q8CGU1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Calcoco1Q8CGU1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Calcoco1Q8CGU1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Prob1-201ENSMUST00000097619 3021 ntBASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Gm11539-201ENSMUST00000119837 557 ntBASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Gm13436-201ENSMUST00000120418 567 ntBASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Gm24841-201ENSMUST00000158676 357 ntBASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Calcoco1Q8CGU1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Calcoco1Q8CGU1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms