Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Gm8097-201ENSMUST00000117903 829 ntBASIC19.78■□□□□ 0.76
Smc4Q8CG47 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smc4Q8CG47 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Gm6443-201ENSMUST00000203599 874 ntBASIC19.78■□□□□ 0.76
Smc4Q8CG47 Gm10060-201ENSMUST00000212002 111 ntBASIC19.78■□□□□ 0.76
Smc4Q8CG47 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc4Q8CG47 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.77■□□□□ 0.76
Smc4Q8CG47 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.77■□□□□ 0.75
Smc4Q8CG47 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Smc4Q8CG47 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smc4Q8CG47 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.76■□□□□ 0.75
Smc4Q8CG47 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.76■□□□□ 0.75
Smc4Q8CG47 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Smc4Q8CG47 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.76■□□□□ 0.75
Smc4Q8CG47 Gm2651-201ENSMUST00000203560 838 ntBASIC19.76■□□□□ 0.75
Smc4Q8CG47 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.76■□□□□ 0.75
Smc4Q8CG47 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.76■□□□□ 0.75
Smc4Q8CG47 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc4Q8CG47 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Gm25990-201ENSMUST00000102440 86 ntBASIC19.75■□□□□ 0.75
Smc4Q8CG47 Gm13418-201ENSMUST00000119097 944 ntBASIC19.75■□□□□ 0.75
Smc4Q8CG47 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc4Q8CG47 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm8825-201ENSMUST00000182565 998 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm4518-201ENSMUST00000182638 718 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.74■□□□□ 0.75
Smc4Q8CG47 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms