Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nup88Q8CEC0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.98■□□□□ 0.63
Nup88Q8CEC0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nup88Q8CEC0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Olfr129-201ENSMUST00000122318 993 ntBASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nup88Q8CEC0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Gm18115-201ENSMUST00000221209 621 ntBASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup88Q8CEC0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms