Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Vps53Q8CCB4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Gm5864-201ENSMUST00000202263 970 ntBASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps53Q8CCB4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Gm27459-201ENSMUST00000184860 107 ntBASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps53Q8CCB4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Mir8098-201ENSMUST00000184011 137 ntBASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps53Q8CCB4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps53Q8CCB4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Phf7-203ENSMUST00000226565 1971 ntBASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Gm43347-201ENSMUST00000200226 580 ntBASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps53Q8CCB4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Gm12895-201ENSMUST00000122214 226 ntBASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps53Q8CCB4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms