Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp44Q8C2S0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Gm15165-201ENSMUST00000118140 502 ntBASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Gm28033-201ENSMUST00000184224 96 ntBASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp44Q8C2S0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Gm27867-201ENSMUST00000184778 125 ntBASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp44Q8C2S0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp44Q8C2S0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp44Q8C2S0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp44Q8C2S0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms