Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ska3Q8C263 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ska3Q8C263 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ska3Q8C263 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.14■□□□□ 0.01
Ska3Q8C263 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ska3Q8C263 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ska3Q8C263 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.13■□□□□ 0.01
Ska3Q8C263 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ska3Q8C263 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ska3Q8C263 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ska3Q8C263 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Gm7367-201ENSMUST00000057611 492 ntBASIC15.13■□□□□ 0.01
Ska3Q8C263 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Ska3Q8C263 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ska3Q8C263 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ska3Q8C263 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.13■□□□□ 0.01
Ska3Q8C263 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ska3Q8C263 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.12■□□□□ 0.01
Ska3Q8C263 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.12■□□□□ 0.01
Ska3Q8C263 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.12■□□□□ 0.01
Ska3Q8C263 Olfr129-201ENSMUST00000122318 993 ntBASIC15.12■□□□□ 0.01
Ska3Q8C263 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Ska3Q8C263 Gm21362-201ENSMUST00000194272 928 ntBASIC15.12■□□□□ 0.01
Ska3Q8C263 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.12■□□□□ 0.01
Ska3Q8C263 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ska3Q8C263 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ska3Q8C263 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Ska3Q8C263 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ska3Q8C263 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.11■□□□□ 0.01
Ska3Q8C263 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ska3Q8C263 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.11■□□□□ 0.01
Ska3Q8C263 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ska3Q8C263 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.11■□□□□ 0.01
Ska3Q8C263 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ska3Q8C263 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ska3Q8C263 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ska3Q8C263 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ska3Q8C263 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ska3Q8C263 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ska3Q8C263 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ska3Q8C263 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ska3Q8C263 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ska3Q8C263 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ska3Q8C263 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ska3Q8C263 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ska3Q8C263 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms