Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smim4Q8C1Q6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Gm36967-201ENSMUST00000193814 266 ntBASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Smim4Q8C1Q6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Gm13436-201ENSMUST00000120418 567 ntBASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.48□□□□□ -0.25
Smim4Q8C1Q6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Mir5130-201ENSMUST00000175160 84 ntBASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Mir1668-201ENSMUST00000184114 107 ntBASIC13.47□□□□□ -0.25
Smim4Q8C1Q6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms