Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf3Q8C120 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sh3rf3Q8C120 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf3Q8C120 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf3Q8C120 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.79■□□□□ 0.28
Sh3rf3Q8C120 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.79■□□□□ 0.28
Sh3rf3Q8C120 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf3Q8C120 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf3Q8C120 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3rf3Q8C120 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3rf3Q8C120 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.77■□□□□ 0.27
Sh3rf3Q8C120 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3rf3Q8C120 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Gm25016-201ENSMUST00000158399 131 ntBASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Gm10052-201ENSMUST00000168019 960 ntBASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Gm7729-201ENSMUST00000050143 801 ntBASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3rf3Q8C120 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms