Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Psmb5-202ENSMUST00000227257 622 ntBASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scfd1Q8BRF7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.33■□□□□ 0.53
Scfd1Q8BRF7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Scfd1Q8BRF7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scfd1Q8BRF7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scfd1Q8BRF7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Gm27646-201ENSMUST00000183989 110 ntBASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Scfd1Q8BRF7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scfd1Q8BRF7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Gm27628-201ENSMUST00000184911 107 ntBASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scfd1Q8BRF7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Gm6257-201ENSMUST00000163864 910 ntBASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scfd1Q8BRF7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms