Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm33142-201ENSMUST00000193913 867 ntBASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Gm21362-201ENSMUST00000194272 928 ntBASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cpsf4Q8BQZ5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Gm7367-201ENSMUST00000057611 492 ntBASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cpsf4Q8BQZ5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Mir770-201ENSMUST00000103252 94 ntBASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Gm17808-201ENSMUST00000200859 894 ntBASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Gm10819-201ENSMUST00000099988 561 ntBASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cpsf4Q8BQZ5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms