Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sfr1Q8BP27 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.36■□□□□ 0.21
Sfr1Q8BP27 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sfr1Q8BP27 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sfr1Q8BP27 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sfr1Q8BP27 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sfr1Q8BP27 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Mir3081-201ENSMUST00000175305 84 ntBASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Ank2-226ENSMUST00000189368 339 ntBASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sfr1Q8BP27 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sfr1Q8BP27 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sfr1Q8BP27 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sfr1Q8BP27 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sfr1Q8BP27 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sfr1Q8BP27 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sfr1Q8BP27 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Gm13312-201ENSMUST00000119631 718 ntBASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sfr1Q8BP27 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sfr1Q8BP27 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms