Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcal1Q8BJL0 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.08■□□□□ 0.33
Smarcal1Q8BJL0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcal1Q8BJL0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcal1Q8BJL0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcal1Q8BJL0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcal1Q8BJL0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Gm27646-201ENSMUST00000183989 110 ntBASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcal1Q8BJL0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcal1Q8BJL0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcal1Q8BJL0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcal1Q8BJL0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms