Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.75■□□□□ 0.11
Pcdh20Q8BIZ0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh20Q8BIZ0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh20Q8BIZ0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh20Q8BIZ0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh20Q8BIZ0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdh20Q8BIZ0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh20Q8BIZ0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Actl10-202ENSMUST00000226583 1501 ntBASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Gm9013-201ENSMUST00000132939 882 ntBASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Gm26039-201ENSMUST00000158152 144 ntBASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh20Q8BIZ0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh20Q8BIZ0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Gm11355-201ENSMUST00000121120 306 ntBASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh20Q8BIZ0 Gm27000-201ENSMUST00000182943 842 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms