Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Gm29707-201ENSMUST00000196325 491 ntBASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Gm18421-201ENSMUST00000204122 625 ntBASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc40Q8BI79 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc40Q8BI79 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Gm22697-201ENSMUST00000175194 63 ntBASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Gm21559-201ENSMUST00000220638 855 ntBASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Gm8587-201ENSMUST00000076538 843 ntBASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.77■□□□□ 0.28
Ccdc40Q8BI79 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc40Q8BI79 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc40Q8BI79 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc40Q8BI79 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc40Q8BI79 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc40Q8BI79 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms