Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SynbQ8BI41 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SynbQ8BI41 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SynbQ8BI41 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SynbQ8BI41 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SynbQ8BI41 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SynbQ8BI41 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SynbQ8BI41 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.34■□□□□ 0.05
SynbQ8BI41 Gm12644-201ENSMUST00000119935 606 ntBASIC15.34■□□□□ 0.05
SynbQ8BI41 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.34■□□□□ 0.05
SynbQ8BI41 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.34■□□□□ 0.05
SynbQ8BI41 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SynbQ8BI41 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SynbQ8BI41 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SynbQ8BI41 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SynbQ8BI41 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SynbQ8BI41 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SynbQ8BI41 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.33■□□□□ 0.05
SynbQ8BI41 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.33■□□□□ 0.05
SynbQ8BI41 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SynbQ8BI41 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SynbQ8BI41 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Gm13312-201ENSMUST00000119631 718 ntBASIC15.33■□□□□ 0.04
SynbQ8BI41 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.33■□□□□ 0.04
SynbQ8BI41 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Gm44450-201ENSMUST00000199528 114 ntBASIC15.33■□□□□ 0.04
SynbQ8BI41 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SynbQ8BI41 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
SynbQ8BI41 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
SynbQ8BI41 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SynbQ8BI41 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SynbQ8BI41 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SynbQ8BI41 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SynbQ8BI41 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SynbQ8BI41 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.32■□□□□ 0.04
SynbQ8BI41 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.32■□□□□ 0.04
SynbQ8BI41 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SynbQ8BI41 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SynbQ8BI41 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SynbQ8BI41 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SynbQ8BI41 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
SynbQ8BI41 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.31■□□□□ 0.04
SynbQ8BI41 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SynbQ8BI41 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.31■□□□□ 0.04
SynbQ8BI41 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.31■□□□□ 0.04
SynbQ8BI41 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.31■□□□□ 0.04
SynbQ8BI41 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynbQ8BI41 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SynbQ8BI41 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SynbQ8BI41 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SynbQ8BI41 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms