Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clrn3Q8BHH8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clrn3Q8BHH8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Gm6659-201ENSMUST00000174752 547 ntBASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clrn3Q8BHH8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clrn3Q8BHH8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clrn3Q8BHH8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Clrn3Q8BHH8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clrn3Q8BHH8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clrn3Q8BHH8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clrn3Q8BHH8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms