Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Slc5a7Q8BGY9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Slc5a7Q8BGY9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Gm10849-201ENSMUST00000100397 618 ntBASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Slc5a7Q8BGY9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Gm12896-201ENSMUST00000118430 226 ntBASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 BC037039-201ENSMUST00000192003 2205 ntBASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc5a7Q8BGY9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Actl10-202ENSMUST00000226583 1501 ntBASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc5a7Q8BGY9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms