Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Samm50Q8BGH2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Samm50Q8BGH2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.89■□□□□ 0.62
Samm50Q8BGH2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Samm50Q8BGH2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Samm50Q8BGH2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Samm50Q8BGH2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Samm50Q8BGH2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Samm50Q8BGH2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Samm50Q8BGH2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Prob1-201ENSMUST00000097619 3021 ntBASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Gm7367-201ENSMUST00000057611 492 ntBASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Samm50Q8BGH2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Samm50Q8BGH2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.86■□□□□ 0.61
Samm50Q8BGH2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Samm50Q8BGH2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Gm37722-201ENSMUST00000193757 208 ntBASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Gm33142-201ENSMUST00000193913 867 ntBASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Gm21362-201ENSMUST00000194272 928 ntBASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms