Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trnp1Q80ZI1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trnp1Q80ZI1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trnp1Q80ZI1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trnp1Q80ZI1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Mir6990-201ENSMUST00000183724 91 ntBASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Gm19164-201ENSMUST00000210667 640 ntBASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trnp1Q80ZI1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Gm25948-201ENSMUST00000175334 112 ntBASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trnp1Q80ZI1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Gm43474-201ENSMUST00000196415 774 ntBASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trnp1Q80ZI1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trnp1Q80ZI1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trnp1Q80ZI1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms