Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim36Q80WG7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.55■□□□□ 0.08
Trim36Q80WG7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim36Q80WG7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
Trim36Q80WG7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim36Q80WG7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms