Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim62Q80V85 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trim62Q80V85 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim62Q80V85 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trim62Q80V85 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim62Q80V85 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trim62Q80V85 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim62Q80V85 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Gm12644-201ENSMUST00000119935 606 ntBASIC16.61■□□□□ 0.25
Trim62Q80V85 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim62Q80V85 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trim62Q80V85 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Trim62Q80V85 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trim62Q80V85 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim62Q80V85 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim62Q80V85 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim62Q80V85 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim62Q80V85 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim62Q80V85 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim62Q80V85 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim62Q80V85 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Trim62Q80V85 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim62Q80V85 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim62Q80V85 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.59■□□□□ 0.25
Trim62Q80V85 Gm27867-201ENSMUST00000184778 125 ntBASIC16.59■□□□□ 0.25
Trim62Q80V85 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim62Q80V85 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Trim62Q80V85 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.59■□□□□ 0.25
Trim62Q80V85 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim62Q80V85 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim62Q80V85 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim62Q80V85 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trim62Q80V85 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim62Q80V85 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim62Q80V85 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim62Q80V85 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Trim62Q80V85 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim62Q80V85 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trim62Q80V85 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim62Q80V85 Gm7153-201ENSMUST00000117092 455 ntBASIC16.58■□□□□ 0.24
Trim62Q80V85 Gm12497-201ENSMUST00000138778 237 ntBASIC16.58■□□□□ 0.24
Trim62Q80V85 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim62Q80V85 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim62Q80V85 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim62Q80V85 Gm17971-201ENSMUST00000190239 806 ntBASIC16.58■□□□□ 0.24
Trim62Q80V85 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim62Q80V85 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim62Q80V85 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim62Q80V85 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms