Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh8Q7TSK3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh8Q7TSK3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh8Q7TSK3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh8Q7TSK3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh8Q7TSK3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh8Q7TSK3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh8Q7TSK3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh8Q7TSK3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.83■□□□□ 0.13
Pcdh8Q7TSK3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh8Q7TSK3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh8Q7TSK3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Gm43514-201ENSMUST00000198852 424 ntBASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh8Q7TSK3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Gm25745-201ENSMUST00000174945 133 ntBASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh8Q7TSK3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms