Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim46Q7TNM2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Gm13836-201ENSMUST00000121159 501 ntBASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Gm23634-201ENSMUST00000175071 91 ntBASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Gm6345-202ENSMUST00000180900 204 ntBASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim46Q7TNM2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim46Q7TNM2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim46Q7TNM2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim46Q7TNM2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim46Q7TNM2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trim46Q7TNM2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim46Q7TNM2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trim46Q7TNM2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.08■□□□□ 0
Trim46Q7TNM2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim46Q7TNM2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trim46Q7TNM2 Gm11950-201ENSMUST00000121615 838 ntBASIC15.08■□□□□ 0
Trim46Q7TNM2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Trim46Q7TNM2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.08■□□□□ 0
Trim46Q7TNM2 Gm45328-201ENSMUST00000210942 917 ntBASIC15.08■□□□□ 0
Trim46Q7TNM2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.08■□□□□ 0
Trim46Q7TNM2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Trim46Q7TNM2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim46Q7TNM2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Trim46Q7TNM2 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.08■□□□□ 0
Trim46Q7TNM2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim46Q7TNM2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim46Q7TNM2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms