Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf139Q7TMV1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf139Q7TMV1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Rnf139Q7TMV1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf139Q7TMV1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf139Q7TMV1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Gm18669-201ENSMUST00000216049 778 ntBASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf139Q7TMV1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Gm44454-201ENSMUST00000198541 138 ntBASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf139Q7TMV1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf139Q7TMV1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Gm10819-201ENSMUST00000099988 561 ntBASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms