Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm7787-201ENSMUST00000216858 688 ntBASIC18.84■□□□□ 0.61
Nup98Q6PFD9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Nup98Q6PFD9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup98Q6PFD9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nup98Q6PFD9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup98Q6PFD9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup98Q6PFD9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup98Q6PFD9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup98Q6PFD9 Gm18489-201ENSMUST00000172565 551 ntBASIC18.83■□□□□ 0.6
Nup98Q6PFD9 Gm5177-201ENSMUST00000183092 997 ntBASIC18.83■□□□□ 0.6
Nup98Q6PFD9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.83■□□□□ 0.6
Nup98Q6PFD9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.83■□□□□ 0.6
Nup98Q6PFD9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nup98Q6PFD9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nup98Q6PFD9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup98Q6PFD9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup98Q6PFD9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Gm27397-201ENSMUST00000184997 107 ntBASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Chchd1-203ENSMUST00000224633 557 ntBASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup98Q6PFD9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup98Q6PFD9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup98Q6PFD9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup98Q6PFD9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms