Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Gm44872-201ENSMUST00000207864 420 ntBASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snrnp40Q6PE01 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Rarb-207ENSMUST00000225921 2756 ntBASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Snrnp40Q6PE01 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Gm8396-201ENSMUST00000057361 823 ntBASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Snrnp40Q6PE01 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Snrnp40Q6PE01 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Snrnp40Q6PE01 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.08□□□□□ -0.15
Snrnp40Q6PE01 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Gm8344-201ENSMUST00000119813 856 ntBASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Gm44492-201ENSMUST00000197012 141 ntBASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snrnp40Q6PE01 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms