Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Kdm3aQ6PCM1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm3aQ6PCM1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm3aQ6PCM1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm3aQ6PCM1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm3aQ6PCM1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm3aQ6PCM1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm3aQ6PCM1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Kdm3aQ6PCM1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm3aQ6PCM1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm3aQ6PCM1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm3aQ6PCM1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm3aQ6PCM1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm3aQ6PCM1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm3aQ6PCM1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Gm8344-201ENSMUST00000119813 856 ntBASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Gm6089-201ENSMUST00000197666 938 ntBASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm3aQ6PCM1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Gm2651-201ENSMUST00000203560 838 ntBASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.31■□□□□ 0.68
Kdm3aQ6PCM1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm3aQ6PCM1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Mir5131-201ENSMUST00000175426 93 ntBASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Kdm3aQ6PCM1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms