Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm18195-201ENSMUST00000207604 706 ntBASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 AW822252-206ENSMUST00000208904 237 ntBASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb4Q6P8W9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Gm44454-201ENSMUST00000198541 138 ntBASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb4Q6P8W9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Hmgb4Q6P8W9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Gm6376-201ENSMUST00000209407 580 ntBASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb4Q6P8W9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms