Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.04■□□□□ 0.48
Abcf1Q6P542 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Abcf1Q6P542 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.03■□□□□ 0.48
Abcf1Q6P542 Asic1-205ENSMUST00000228185 1818 ntBASIC18.03■□□□□ 0.48
Abcf1Q6P542 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abcf1Q6P542 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Abcf1Q6P542 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Abcf1Q6P542 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Gm18958-201ENSMUST00000174258 762 ntBASIC18.01■□□□□ 0.47
Abcf1Q6P542 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.01■□□□□ 0.47
Abcf1Q6P542 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abcf1Q6P542 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18■□□□□ 0.47
Abcf1Q6P542 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Abcf1Q6P542 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18■□□□□ 0.47
Abcf1Q6P542 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms