Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Casc4Q6P2L7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Gm15794-201ENSMUST00000120182 631 ntBASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Olfr129-201ENSMUST00000122318 993 ntBASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Gm27742-201ENSMUST00000184667 60 ntBASIC16.28■□□□□ 0.2
Casc4Q6P2L7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Casc4Q6P2L7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Gm44430-201ENSMUST00000203376 995 ntBASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.27■□□□□ 0.2
Casc4Q6P2L7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Casc4Q6P2L7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Casc4Q6P2L7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Casc4Q6P2L7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Casc4Q6P2L7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Casc4Q6P2L7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.26■□□□□ 0.19
Casc4Q6P2L7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.25■□□□□ 0.19
Casc4Q6P2L7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Gm10819-201ENSMUST00000099988 561 ntBASIC16.25■□□□□ 0.19
Casc4Q6P2L7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms