Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Gm12895-201ENSMUST00000122214 226 ntBASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtl3Q6P1Y1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.59■□□□□ 0.25
Rtl3Q6P1Y1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtl3Q6P1Y1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtl3Q6P1Y1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtl3Q6P1Y1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rtl3Q6P1Y1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.58■□□□□ 0.25
Rtl3Q6P1Y1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Gm43514-201ENSMUST00000198852 424 ntBASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtl3Q6P1Y1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Gm5864-201ENSMUST00000202263 970 ntBASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rtl3Q6P1Y1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.56■□□□□ 0.24
Rtl3Q6P1Y1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms