Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Clcn1Q64347 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Clcn1Q64347 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.3■□□□□ 0.84
Clcn1Q64347 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.3■□□□□ 0.84
Clcn1Q64347 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.3■□□□□ 0.84
Clcn1Q64347 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.3■□□□□ 0.84
Clcn1Q64347 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn1Q64347 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Clcn1Q64347 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Clcn1Q64347 Gm27397-201ENSMUST00000184997 107 ntBASIC20.29■□□□□ 0.84
Clcn1Q64347 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Clcn1Q64347 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.29■□□□□ 0.84
Clcn1Q64347 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clcn1Q64347 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clcn1Q64347 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Clcn1Q64347 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Gm24513-201ENSMUST00000174964 138 ntBASIC20.28■□□□□ 0.84
Clcn1Q64347 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clcn1Q64347 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcn1Q64347 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Clcn1Q64347 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Clcn1Q64347 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.27■□□□□ 0.84
Clcn1Q64347 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Gm9172-201ENSMUST00000212092 954 ntBASIC20.27■□□□□ 0.84
Clcn1Q64347 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.27■□□□□ 0.84
Clcn1Q64347 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Gm10175-201ENSMUST00000086013 645 ntBASIC20.27■□□□□ 0.84
Clcn1Q64347 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcn1Q64347 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clcn1Q64347 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Clcn1Q64347 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clcn1Q64347 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Clcn1Q64347 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.26■□□□□ 0.83
Clcn1Q64347 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.26■□□□□ 0.83
Clcn1Q64347 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.26■□□□□ 0.83
Clcn1Q64347 Gm5682-201ENSMUST00000173402 505 ntBASIC20.26■□□□□ 0.83
Clcn1Q64347 Gm27646-201ENSMUST00000183989 110 ntBASIC20.26■□□□□ 0.83
Clcn1Q64347 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.26■□□□□ 0.83
Clcn1Q64347 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Clcn1Q64347 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Clcn1Q64347 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn1Q64347 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Clcn1Q64347 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.25■□□□□ 0.83
Clcn1Q64347 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.25■□□□□ 0.83
Clcn1Q64347 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms