Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm15565-201ENSMUST00000118890 427 ntBASIC16.5■□□□□ 0.23
Six1Q62231 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.5■□□□□ 0.23
Six1Q62231 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Six1Q62231 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.5■□□□□ 0.23
Six1Q62231 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Six1Q62231 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Six1Q62231 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Six1Q62231 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.49■□□□□ 0.23
Six1Q62231 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.49■□□□□ 0.23
Six1Q62231 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Gm44430-201ENSMUST00000203376 995 ntBASIC16.49■□□□□ 0.23
Six1Q62231 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.49■□□□□ 0.23
Six1Q62231 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Six1Q62231 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.49■□□□□ 0.23
Six1Q62231 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Six1Q62231 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.49■□□□□ 0.23
Six1Q62231 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.49■□□□□ 0.23
Six1Q62231 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Six1Q62231 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six1Q62231 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.48■□□□□ 0.23
Six1Q62231 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.48■□□□□ 0.23
Six1Q62231 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Six1Q62231 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Six1Q62231 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.48■□□□□ 0.23
Six1Q62231 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Six1Q62231 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six1Q62231 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Six1Q62231 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.47■□□□□ 0.23
Six1Q62231 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.47■□□□□ 0.23
Six1Q62231 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Six1Q62231 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.47■□□□□ 0.23
Six1Q62231 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Six1Q62231 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.47■□□□□ 0.23
Six1Q62231 Gm27389-201ENSMUST00000183622 195 ntBASIC16.47■□□□□ 0.23
Six1Q62231 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.47■□□□□ 0.23
Six1Q62231 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six1Q62231 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms