Protein–RNA interactions for Protein: Q62186

Ssr4, Translocon-associated protein subunit delta, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr4Q62186 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.33■□□□□ 0.2
Ssr4Q62186 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.33■□□□□ 0.2
Ssr4Q62186 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssr4Q62186 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssr4Q62186 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Gm18489-201ENSMUST00000172565 551 ntBASIC16.32■□□□□ 0.2
Ssr4Q62186 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssr4Q62186 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.32■□□□□ 0.2
Ssr4Q62186 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssr4Q62186 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ssr4Q62186 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssr4Q62186 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr4Q62186 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.32■□□□□ 0.2
Ssr4Q62186 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ssr4Q62186 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Ssr4Q62186 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.31■□□□□ 0.2
Ssr4Q62186 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.31■□□□□ 0.2
Ssr4Q62186 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.31■□□□□ 0.2
Ssr4Q62186 Gm8396-201ENSMUST00000057361 823 ntBASIC16.31■□□□□ 0.2
Ssr4Q62186 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.31■□□□□ 0.2
Ssr4Q62186 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ssr4Q62186 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr4Q62186 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Ssr4Q62186 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Gm9682-201ENSMUST00000197505 556 ntBASIC16.3■□□□□ 0.2
Ssr4Q62186 Gm44872-201ENSMUST00000207864 420 ntBASIC16.3■□□□□ 0.2
Ssr4Q62186 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssr4Q62186 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.3■□□□□ 0.2
Ssr4Q62186 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssr4Q62186 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.3■□□□□ 0.2
Ssr4Q62186 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssr4Q62186 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr4Q62186 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr4Q62186 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ssr4Q62186 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr4Q62186 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr4Q62186 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr4Q62186 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr4Q62186 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.29■□□□□ 0.2
Ssr4Q62186 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ssr4Q62186 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.29■□□□□ 0.2
Ssr4Q62186 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms