Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim27Q62158 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim27Q62158 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.77■□□□□ 0.76
Trim27Q62158 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim27Q62158 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.77■□□□□ 0.76
Trim27Q62158 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim27Q62158 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim27Q62158 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim27Q62158 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trim27Q62158 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.76■□□□□ 0.75
Trim27Q62158 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim27Q62158 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim27Q62158 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Trim27Q62158 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.75■□□□□ 0.75
Trim27Q62158 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.75■□□□□ 0.75
Trim27Q62158 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim27Q62158 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trim27Q62158 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim27Q62158 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim27Q62158 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.74■□□□□ 0.75
Trim27Q62158 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim27Q62158 Mir3081-201ENSMUST00000175305 84 ntBASIC19.74■□□□□ 0.75
Trim27Q62158 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.74■□□□□ 0.75
Trim27Q62158 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim27Q62158 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim27Q62158 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Trim27Q62158 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim27Q62158 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim27Q62158 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim27Q62158 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim27Q62158 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim27Q62158 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Trim27Q62158 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trim27Q62158 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim27Q62158 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim27Q62158 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim27Q62158 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.72■□□□□ 0.75
Trim27Q62158 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim27Q62158 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trim27Q62158 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim27Q62158 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms