Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ctr9Q62018 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.92■□□□□ 0.62
Ctr9Q62018 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ctr9Q62018 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.91■□□□□ 0.62
Ctr9Q62018 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.91■□□□□ 0.62
Ctr9Q62018 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.91■□□□□ 0.62
Ctr9Q62018 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ctr9Q62018 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.91■□□□□ 0.62
Ctr9Q62018 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ctr9Q62018 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.9■□□□□ 0.62
Ctr9Q62018 Mzt1-203ENSMUST00000227948 952 ntBASIC18.9■□□□□ 0.62
Ctr9Q62018 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.9■□□□□ 0.62
Ctr9Q62018 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ctr9Q62018 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ctr9Q62018 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ctr9Q62018 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.9■□□□□ 0.62
Ctr9Q62018 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ctr9Q62018 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ctr9Q62018 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ctr9Q62018 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctr9Q62018 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctr9Q62018 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctr9Q62018 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Gm25406-201ENSMUST00000157599 105 ntBASIC18.89■□□□□ 0.61
Ctr9Q62018 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctr9Q62018 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctr9Q62018 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.89■□□□□ 0.61
Ctr9Q62018 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctr9Q62018 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ctr9Q62018 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ctr9Q62018 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctr9Q62018 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ctr9Q62018 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ctr9Q62018 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Ctr9Q62018 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Ctr9Q62018 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.88■□□□□ 0.61
Ctr9Q62018 Rps4l-201ENSMUST00000071745 943 ntBASIC18.88■□□□□ 0.61
Ctr9Q62018 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctr9Q62018 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Ctr9Q62018 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ctr9Q62018 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctr9Q62018 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ctr9Q62018 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctr9Q62018 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.87■□□□□ 0.61
Ctr9Q62018 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms